Load LD data for a lead SNP

Load LD data for a lead SNP

Usage

LoadLDData(ld.file)

Arguments

ld.file

Path to LD file

Value

data.frame with columns: chromosome, base_pair_location, r2

Details

Required columns: chromosome, position, r2

Column matching is case-insensitive. Values should be pairwise r-squared to a lead SNP.