Find accessible peaks in a set of cells
Usage
AccessiblePeaks(
object,
assay = NULL,
layer = NULL,
idents = NULL,
cells = NULL,
min.cells = 10
)Arguments
- object
A Seurat object
- assay
Name of assay to use. If NULL, use the default assay.
- layer
Name of layer to use. If NULL, use the default layer.
- idents
A set of identity classes to find accessible peaks for
- cells
A vector of cells to find accessible peaks for
- min.cells
Minimum number of cells with the peak accessible (>0 counts) for the peak to be called accessible