Plot DNA sequence motif — MotifPlot • Signac

Plot position weight matrix or position frequency matrix for different DNA sequence motifs.

MotifPlot(object, motifs, assay = NULL, use.names = TRUE, ...)

Arguments

object	A Seurat object
motifs	A list of motifs to plot
assay	Name of the assay to use
use.names	Use motif names stored in the motif object
...	Additional parameters passed to `ggseqlogo`

Returns a ggplot object

# \donttest{
motif.obj <- Seurat::GetAssayData(atac_small, slot = "motifs")
MotifPlot(atac_small, motifs = head(colnames(motif.obj)))
# }