Extract the coordinates of the longest transcript for a gene stored in the annotations within an object.
LookupGeneCoords(object, gene, assay = NULL)
| object | A Seurat object |
|---|---|
| gene | Name of a gene to extract |
| assay | Name of assay to use |
LookupGeneCoords(atac_small, gene = "MIR1302-10")#> GRanges object with 1 range and 0 metadata columns: #> seqnames ranges strand #> <Rle> <IRanges> <Rle> #> [1] chr1 29554-31109 * #> ------- #> seqinfo: 1 sequence from an unspecified genome; no seqlengths