Plot sequencing depth correlation — DepthCor • Signac

Compute the correlation between total counts and each reduced dimension component.

DepthCor(object, assay = NULL, reduction = "lsi", n = 10, ...)

Arguments

object	A `Seurat` object
assay	Name of assay to use for sequencing depth. If NULL, use the default assay.
reduction	Name of a dimension reduction stored in the input object
n	Number of components to use. If `NULL`, use all components.
...	Additional arguments passed to `cor`

Returns a ggplot object

# \donttest{
DepthCor(object = atac_small)
# }