Converts from motif name to motif ID or vice versa. To convert common names to IDs, use the name parameter. To convert IDs to common names, use the id parameter.

ConvertMotifID(object, ...)

# S3 method for default
ConvertMotifID(object, name, id, ...)

# S3 method for Motif
ConvertMotifID(object, ...)

# S3 method for ChromatinAssay
ConvertMotifID(object, ...)

# S3 method for Seurat
ConvertMotifID(object, assay = NULL, ...)

Arguments

object

A Seurat, ChromatinAssay, or Motif object

...

Arguments passed to other methods

name

A vector of motif names

id

A vector of motif IDs. Only one of name and id should be supplied

assay

For Seurat object. Name of assay to use. If NULL, use the default assay

Value

Returns a character vector with the same length and order as the input. Any names or IDs that were not found will be stored as NA.