Compute the correlation between total counts and each reduced dimension component.
DepthCor(object, assay = NULL, reduction = "lsi", n = 10, ...)Arguments
- object
A
SeuratObject::Seurat()object- assay
Name of assay to use for sequencing depth. If NULL, use the default assay.
- reduction
Name of a dimension reduction stored in the input object
- n
Number of components to use. If
NULL, use all components.- ...
Additional arguments passed to
stats::cor()
Value
Returns a ggplot2::ggplot() object
Examples
# \donttest{
DepthCor(object = atac_small)
# }