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Signac
1.17.0
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Vignettes
Vignettes overview
Human PBMCs
Adult mouse brain
Joint RNA and ATAC analysis: 10x multiomic
Joint RNA and ATAC analysis: SNARE-seq
Peak calling
Merging objects
scATAC-seq integration
Mitochondrial genotyping
Motif analysis
Trajectory analysis
Finding co-accessible sites
Transcription factor footprinting
Data visualization
Parallel computing
Data structures and object interaction
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All vignettes
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Finding co-accessible networks with Cicero
Data structures and object interaction
Frequently asked questions
Transcription factor footprinting
Parallel and distributed processing
Installation
scATAC-seq data integration
Merging objects
Joint single-cell mitochondrial DNA genotyping and DNA accessibility analysis
Building trajectories with Monocle 3
Motif analysis with Signac
Analyzing adult mouse brain scATAC-seq
Vignettes overview
Joint RNA and ATAC analysis: 10x multiomic
Analyzing PBMC scATAC-seq
Calling peaks
Joint RNA and ATAC analysis: SNARE-seq
Visualization of genomic regions