Software

Signac

Signac is an R toolkit for the analysis of single-cell chromatin data.

Docs GitHub CRAN Bioconda

fragtk

fragtk is a fast and efficient Rust tool for working with single-cell fragment files.

GitHub

Sinto

Sinto is a Python package for processing aligned single-cell reads.

Docs GitHub PyPI Bioconda

Molecular technologies

NTT-seq

Nanobody-tethered tagmentation followed by sequencing (NTT-seq) is a multimodal single-cell method capable of measuring multiple histone modifications in a single cell.

Website Plasmids Paper